Back to search

Peptide record

TPDB18844

Antibacterial standard
9 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB18844
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 9-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
ELNNALQNL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C43H73N13O16
RDCGHIKMFPSTWYV
NL
1028.13
3.29
0
1
4
-1
1.74
-0.478
141.11
Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour
0
0.00
4
Residue Composition
number
1
A
0
R
3
N
0
D
0
C
1
E
1
Q
0
G
0
H
0
I
3
L
0
K
0
M
0
F
0
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 0 N: 3 D: 0 C: 0 E: 1 Q: 1 G: 0 H: 0 I: 0 L: 3 K: 0 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
9 reviewed residue count
C43H73N13O16 sequence-only estimate (linear, free termini)
1028.13 sequence-only estimate (linear, free termini)
3.29 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
1.74 sequence-only estimate (linear, free termini)
-0.478 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA