TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB18841

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia dbAMP 3.0 DRAMP DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 75-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, dbAMP 3.0, DRAMP, and other sources, with an available 3D structural model.

Sequence

ELEEQVMHVLDQVSELAHELLHKLTGEELERAAYFNWWATEMMLELIKSDDEREIREIEEEARRILEHLEELARK

FASTA

>TPDB18841|Antibacterial;Antiviral|length=75
ELEEQVMHVLDQVSELAHELLHKLTGEELERAAYFNWWATEMMLELIKSDDEREIREIEEEARRILEHLEELARK

Formula C399H633N109O128S3

Absent Amino Acids CP

Common Amino Acids E

Mass 9101.25

PI 4.36

Basic Residues 13

Acidic Residues 22

Hydrophobic Residues 32

Net Charge -13

Boman Index 40.64

Hydrophobicity -0.667

Aliphatic Index 102.80

Half Life

Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 12490

Absorbance 280nm 137.23

Polar Residues 8

number

6

A

6

R

1

N

3

D

0

C

19

E

2

Q

1

G

4

H

4

I

12

L

3

K

3

M

1

F

0

P

2

S

2

T

2

W

1

Y

3

V

Amino Acid Distribution

A: 6 R: 6 N: 1 D: 3 C: 0 E: 19 Q: 2 G: 1 H: 4 I: 4 L: 12 K: 3 M: 3 F: 1 P: 0 S: 2 T: 2 W: 2 Y: 1 V: 3

Length

75

Formula

C399H633N109O128S3

Mass

9101.25

PI

4.36

Net Charge

-13

Boman Index

40.64

Hydrophobicity

-0.667

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAMP DRAVP 2.0