TPDB

3D PDB MODEL

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TPDB ID TPDB18840

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia dbAMP 3.0 DRAVP 2.0

Sequence_Type

modified_plain

Has_Modification Yes

Description A 24-aa modified multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, dbAMP 3.0, and DRAVP 2.0, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

EMTWEEWEKKVEELEKKIEELLXX

FASTA

>TPDB18840|Antibacterial;Antiviral|length=24
EMTWEEWEKKVEELEKKIEELLXX

Formula C129H202N28O42S1

Absent Amino Acids ARNDCQGHFPSY

Common Amino Acids E

Mass 2849.25

PI 4.16

Basic Residues 4

Acidic Residues 9

Hydrophobic Residues 8

Net Charge -5

Boman Index 16.43

Hydrophobicity -1.150

Aliphatic Index 77.08

Half Life

Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 11000

Absorbance 280nm 386.07

Polar Residues 1

number

0

A

0

R

0

N

0

D

0

C

9

E

0

Q

0

G

0

H

1

I

3

L

4

K

1

M

0

F

0

P

0

S

1

T

2

W

0

Y

1

V

Amino Acid Distribution

A: 0 R: 0 N: 0 D: 0 C: 0 E: 9 Q: 0 G: 0 H: 0 I: 1 L: 3 K: 4 M: 1 F: 0 P: 0 S: 0 T: 1 W: 2 Y: 0 V: 1

Length

24

Formula

C129H202N28O42S1

Mass

2849.25

PI

4.16

Net Charge

-5

Boman Index

16.43

Hydrophobicity

-1.150

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0