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Peptide record

TPDB18814

Antibacterial standard
20 amino acids
Basic Information
3D PDB MODEL
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TPDB18814
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 20-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
ELLLNPTHQIYPVTQPLAPV
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C105H167N25O29
RDCGKMFSW
LP
2243.63
5.13
1
1
9
-1
-0.00
0.180
131.50
Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour
1490
0.66
6
Residue Composition
number
1
A
0
R
1
N
0
D
0
C
1
E
2
Q
0
G
1
H
1
I
4
L
0
K
0
M
0
F
4
P
0
S
2
T
0
W
1
Y
2
V
Amino Acid Distribution
A: 1 R: 0 N: 1 D: 0 C: 0 E: 1 Q: 2 G: 0 H: 1 I: 1 L: 4 K: 0 M: 0 F: 0 P: 4 S: 0 T: 2 W: 0 Y: 1 V: 2
Chemical Descriptors
20 reviewed residue count
C105H167N25O29 sequence-only estimate (linear, free termini)
2243.63 sequence-only estimate (linear, free termini)
5.13 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
-0.00 sequence-only estimate (linear, free termini)
0.180 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA