TPDB

3D PDB MODEL

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TPDB ID TPDB18798

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia dbAMP 3.0 DRAVP 2.0

Sequence_Type

modified_plain

Has_Modification Yes

Description A 20-aa modified multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, dbAMP 3.0, and DRAVP 2.0, with an available 3D structural model.

Modification

Modified, details unspecified

Sequence

EKIXQSLXFIXKSDXALHNV

FASTA

>TPDB18798|Antibacterial;Antiviral|length=20
EKIXQSLXFIXKSDXALHNV

Formula C83H136N22O25

Absent Amino Acids RCGMPTWY

Common Amino Acids ILKS

Mass 1842.13

PI 7.79

Basic Residues 3

Acidic Residues 2

Hydrophobic Residues 7

Net Charge +0

Boman Index 4.48

Hydrophobicity -0.060

Aliphatic Index 97.50

Half Life

Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 0

Absorbance 280nm 0.00

Polar Residues 4

number

1

A

0

R

1

N

1

D

0

C

1

E

1

Q

0

G

1

H

2

I

2

L

2

K

0

M

1

F

0

P

2

S

0

T

0

W

0

Y

1

V

Amino Acid Distribution

A: 1 R: 0 N: 1 D: 1 C: 0 E: 1 Q: 1 G: 0 H: 1 I: 2 L: 2 K: 2 M: 0 F: 1 P: 0 S: 2 T: 0 W: 0 Y: 0 V: 1

Length

20

Formula

C83H136N22O25

Mass

1842.13

PI

7.79

Net Charge

+0

Boman Index

4.48

Hydrophobicity

-0.060

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0