TPDB

3D PDB MODEL

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TPDB ID TPDB18786

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 20-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

EKINQSLAFIRKSDELLHNV

FASTA

>TPDB18786|Antibacterial;Antiviral|length=20
EKINQSLAFIRKSDELLHNV

Formula C104H172N30O32

Absent Amino Acids CGMPTWY

Common Amino Acids L

Mass 2354.69

PI 7.79

Basic Residues 4

Acidic Residues 3

Hydrophobic Residues 8

Net Charge +0

Boman Index 7.17

Hydrophobicity -0.445

Aliphatic Index 117.00

Half Life

Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 0

Absorbance 280nm 0.00

Polar Residues 5

number

1

A

1

R

2

N

1

D

0

C

2

E

1

Q

0

G

1

H

2

I

3

L

2

K

0

M

1

F

0

P

2

S

0

T

0

W

0

Y

1

V

Amino Acid Distribution

A: 1 R: 1 N: 2 D: 1 C: 0 E: 2 Q: 1 G: 0 H: 1 I: 2 L: 3 K: 2 M: 0 F: 1 P: 0 S: 2 T: 0 W: 0 Y: 0 V: 1

Length

20

Formula

C104H172N30O32

Mass

2354.69

PI

7.79

Net Charge

+0

Boman Index

7.17

Hydrophobicity

-0.445

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0