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Peptide record

TPDB18723

Antibacterial standard
6 amino acids
Basic Information
3D PDB MODEL
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TPDB18723
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 6-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
ECMWCP
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C32H45N7O9S3
ARNDQGHILKFSTYV
C
767.93
3.29
0
1
2
-1
-0.07
0.150
0.00
Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour
5625
7.32
2
Residue Composition
number
0
A
0
R
0
N
0
D
2
C
1
E
0
Q
0
G
0
H
0
I
0
L
0
K
1
M
0
F
1
P
0
S
0
T
1
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 2 E: 1 Q: 0 G: 0 H: 0 I: 0 L: 0 K: 0 M: 1 F: 0 P: 1 S: 0 T: 0 W: 1 Y: 0 V: 0
Chemical Descriptors
6 reviewed residue count
C32H45N7O9S3 sequence-only estimate (linear, free termini)
767.93 sequence-only estimate (linear, free termini)
3.29 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
-0.07 sequence-only estimate (linear, free termini)
0.150 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA