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Peptide record

TPDB18649

Antibacterial Antifungal standard
24 amino acids
Basic Information
3D PDB MODEL
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TPDB18649
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 24-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
DSHEKRHHGYKRKSHEKHHSHRGY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C129H193N51O36
ANCQILMFPTWV
H
3034.27
10.40
14
3
2
+5
5.44
-2.825
0.00
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
2980
0.98
5
Residue Composition
number
0
A
3
R
0
N
1
D
0
C
2
E
0
Q
2
G
7
H
0
I
0
L
4
K
0
M
0
F
0
P
3
S
0
T
0
W
2
Y
0
V
Amino Acid Distribution
A: 0 R: 3 N: 0 D: 1 C: 0 E: 2 Q: 0 G: 2 H: 7 I: 0 L: 0 K: 4 M: 0 F: 0 P: 0 S: 3 T: 0 W: 0 Y: 2 V: 0
Chemical Descriptors
24 reviewed residue count
C129H193N51O36 sequence-only estimate (linear, free termini)
3034.27 sequence-only estimate (linear, free termini)
10.40 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
5.44 sequence-only estimate (linear, free termini)
-2.825 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb