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Peptide record

TPDB18644

Antibacterial Antifungal standard
30 amino acids
Basic Information
3D PDB MODEL
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TPDB18644
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 30-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
DSHEERHHGRHGHHGYGRKFHEKHHSHRGY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C158H222N64O43
ANCQILMPTWV
H
3705.90
9.97
16
4
3
+3
4.86
-2.507
0.00
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
2980
0.80
4
Residue Composition
number
0
A
4
R
0
N
1
D
0
C
3
E
0
Q
5
G
10
H
0
I
0
L
2
K
0
M
1
F
0
P
2
S
0
T
0
W
2
Y
0
V
Amino Acid Distribution
A: 0 R: 4 N: 0 D: 1 C: 0 E: 3 Q: 0 G: 5 H: 10 I: 0 L: 0 K: 2 M: 0 F: 1 P: 0 S: 2 T: 0 W: 0 Y: 2 V: 0
Chemical Descriptors
30 reviewed residue count
C158H222N64O43 sequence-only estimate (linear, free termini)
3705.90 sequence-only estimate (linear, free termini)
9.97 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
4.86 sequence-only estimate (linear, free termini)
-2.507 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb