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Peptide record

TPDB18632

Antibacterial Antifungal standard
24 amino acids
Basic Information
3D PDB MODEL
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TPDB18632
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb dbAMP
standard
No
A 24-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia, CAFPdb, and dbAMP, with an available 3D structural model.
Sequence
DSHAKRAAGYKRKFHEKHHSHRGY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C127H191N47O33
NCQILMPTWV
H
2904.21
10.69
12
2
6
+5
4.27
-2.038
12.50
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
2980
1.03
4
Residue Composition
number
3
A
3
R
0
N
1
D
0
C
1
E
0
Q
2
G
5
H
0
I
0
L
4
K
0
M
1
F
0
P
2
S
0
T
0
W
2
Y
0
V
Amino Acid Distribution
A: 3 R: 3 N: 0 D: 1 C: 0 E: 1 Q: 0 G: 2 H: 5 I: 0 L: 0 K: 4 M: 0 F: 1 P: 0 S: 2 T: 0 W: 0 Y: 2 V: 0
Chemical Descriptors
24 reviewed residue count
C127H191N47O33 sequence-only estimate (linear, free termini)
2904.21 sequence-only estimate (linear, free termini)
10.69 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
4.27 sequence-only estimate (linear, free termini)
-2.038 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb