TPDB

3D PDB MODEL

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TPDB ID TPDB18486

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 18-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

CWVRLGRYILRRLKTPFT

FASTA

>TPDB18486|Antibacterial;Antiviral|length=18
CWVRLGRYILRRLKTPFT

Formula C106H172N32O22S1

Absent Amino Acids ANDEQHMS

Common Amino Acids R

Mass 2278.79

PI 11.95

Basic Residues 5

Acidic Residues 0

Hydrophobic Residues 8

Net Charge +5

Boman Index -1.11

Hydrophobicity -0.117

Aliphatic Index 102.78

Half Life

Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 6990

Absorbance 280nm 306.74

Polar Residues 4

number

0

A

4

R

0

N

0

D

1

C

0

E

0

Q

1

G

0

H

1

I

3

L

1

K

0

M

1

F

1

P

0

S

2

T

1

W

1

Y

1

V

Amino Acid Distribution

A: 0 R: 4 N: 0 D: 0 C: 1 E: 0 Q: 0 G: 1 H: 0 I: 1 L: 3 K: 1 M: 0 F: 1 P: 1 S: 0 T: 2 W: 1 Y: 1 V: 1

Length

18

Formula

C106H172N32O22S1

Mass

2278.79

PI

11.95

Net Charge

+5

Boman Index

-1.11

Hydrophobicity

-0.117

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0