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Peptide record

TPDB18470

Antibacterial standard
7 amino acids
Basic Information
3D PDB MODEL
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TPDB18470
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 7-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
CVWAVVV
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C37H58N8O8S1
RNDEQGHILKMFPSTY
V
774.98
5.33
0
0
6
-0
-3.08
2.886
180.00
Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour
5500
7.10
1
Residue Composition
number
1
A
0
R
0
N
0
D
1
C
0
E
0
Q
0
G
0
H
0
I
0
L
0
K
0
M
0
F
0
P
0
S
0
T
1
W
0
Y
4
V
Amino Acid Distribution
A: 1 R: 0 N: 0 D: 0 C: 1 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 0 K: 0 M: 0 F: 0 P: 0 S: 0 T: 0 W: 1 Y: 0 V: 4
Chemical Descriptors
7 reviewed residue count
C37H58N8O8S1 sequence-only estimate (linear, free termini)
774.98 sequence-only estimate (linear, free termini)
5.33 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
-3.08 sequence-only estimate (linear, free termini)
2.886 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA