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Peptide record

TPDB18431

Antibacterial Antifungal standard
8 amino acids
Basic Information
3D PDB MODEL
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TPDB18431
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb dbAMP
standard
No
A 8-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia, CAFPdb, and dbAMP, with an available 3D structural model.
Sequence
CKYLLRWR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C53H84N16O10S1
ANDEQGHIMFPSTV
RL
1137.41
10.42
3
0
4
+3
2.76
-0.625
97.50
Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour
6990
6.15
2
Residue Composition
number
0
A
2
R
0
N
0
D
1
C
0
E
0
Q
0
G
0
H
0
I
2
L
1
K
0
M
0
F
0
P
0
S
0
T
1
W
1
Y
0
V
Amino Acid Distribution
A: 0 R: 2 N: 0 D: 0 C: 1 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 2 K: 1 M: 0 F: 0 P: 0 S: 0 T: 0 W: 1 Y: 1 V: 0
Chemical Descriptors
8 reviewed residue count
C53H84N16O10S1 sequence-only estimate (linear, free termini)
1137.41 sequence-only estimate (linear, free termini)
10.42 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
2.76 sequence-only estimate (linear, free termini)
-0.625 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb