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Peptide record

TPDB18386

Antibacterial Antifungal standard
6 amino acids
Basic Information
3D PDB MODEL
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TPDB18386
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb dbAMP
standard
No
A 6-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia, CAFPdb, and dbAMP, with an available 3D structural model.
Sequence
CKAAFC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C27H43N7O7S2
RNDEQGHILMPSTWYV
AC
641.80
8.29
1
0
3
+1
-0.60
1.250
33.33
Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour
125
0.19
2
Residue Composition
number
2
A
0
R
0
N
0
D
2
C
0
E
0
Q
0
G
0
H
0
I
0
L
1
K
0
M
1
F
0
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 2 R: 0 N: 0 D: 0 C: 2 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 0 K: 1 M: 0 F: 1 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
6 reviewed residue count
C27H43N7O7S2 sequence-only estimate (linear, free termini)
641.80 sequence-only estimate (linear, free termini)
8.29 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
-0.60 sequence-only estimate (linear, free termini)
1.250 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb