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Peptide record

TPDB18378

Antibacterial Antifungal standard
37 amino acids
Basic Information
3D PDB MODEL
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TPDB18378
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb
standard
No
A 37-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia and CAFPdb, with an available 3D structural model.
Sequence
CIPDGGRCHESDPGPGCCSGFCYRERNWKDGDCRKRP
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C169H258N58O54S6
AQLMTV
CG
4158.62
7.64
8
6
4
+1
3.48
-1.305
10.54
Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour
7365
1.77
10
Residue Composition
number
0
A
5
R
1
N
4
D
6
C
2
E
0
Q
6
G
1
H
1
I
0
L
2
K
0
M
1
F
4
P
2
S
0
T
1
W
1
Y
0
V
Amino Acid Distribution
A: 0 R: 5 N: 1 D: 4 C: 6 E: 2 Q: 0 G: 6 H: 1 I: 1 L: 0 K: 2 M: 0 F: 1 P: 4 S: 2 T: 0 W: 1 Y: 1 V: 0
Chemical Descriptors
37 reviewed residue count
C169H258N58O54S6 sequence-only estimate (linear, free termini)
4158.62 sequence-only estimate (linear, free termini)
7.64 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
3.48 sequence-only estimate (linear, free termini)
-1.305 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

CAFPdb