TPDB

3D PDB MODEL

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TPDB ID TPDB18276

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 29-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

AWDFGSVGGVLNSLGKMVHQIFGSAYTAL

FASTA

>TPDB18276|Antibacterial;Antiviral|length=29
AWDFGSVGGVLNSLGKMVHQIFGSAYTAL

Formula C139H209N35O39S1

Absent Amino Acids RCEP

Common Amino Acids G

Mass 3026.46

PI 7.75

Basic Residues 2

Acidic Residues 1

Hydrophobic Residues 15

Net Charge +0

Boman Index -2.81

Hydrophobicity 0.569

Aliphatic Index 94.14

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 6990

Absorbance 280nm 230.96

Polar Residues 7

number

3

A

0

R

1

N

1

D

0

C

0

E

1

Q

5

G

1

H

1

I

3

L

1

K

1

M

2

F

0

P

3

S

1

T

1

W

1

Y

3

V

Amino Acid Distribution

A: 3 R: 0 N: 1 D: 1 C: 0 E: 0 Q: 1 G: 5 H: 1 I: 1 L: 3 K: 1 M: 1 F: 2 P: 0 S: 3 T: 1 W: 1 Y: 1 V: 3

Length

29

Formula

C139H209N35O39S1

Mass

3026.46

PI

7.75

Net Charge

+0

Boman Index

-2.81

Hydrophobicity

0.569

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0