TPDB

3D PDB MODEL

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TPDB ID TPDB18269

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 29-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

AWDFGSIGGVFTSVGKLVHQVFGTAYGVL

FASTA

>TPDB18269|Antibacterial;Antiviral|length=29
AWDFGSIGGVFTSVGKLVHQVFGTAYGVL

Formula C143H210N34O38

Absent Amino Acids RNCEMP

Common Amino Acids G

Mass 3013.45

PI 7.75

Basic Residues 2

Acidic Residues 1

Hydrophobic Residues 15

Net Charge +0

Boman Index -3.24

Hydrophobicity 0.807

Aliphatic Index 97.24

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 6990

Absorbance 280nm 231.96

Polar Residues 6

number

2

A

0

R

0

N

1

D

0

C

0

E

1

Q

6

G

1

H

1

I

2

L

1

K

0

M

3

F

0

P

2

S

2

T

1

W

1

Y

5

V

Amino Acid Distribution

A: 2 R: 0 N: 0 D: 1 C: 0 E: 0 Q: 1 G: 6 H: 1 I: 1 L: 2 K: 1 M: 0 F: 3 P: 0 S: 2 T: 2 W: 1 Y: 1 V: 5

Length

29

Formula

C143H210N34O38

Mass

3013.45

PI

7.75

Net Charge

+0

Boman Index

-3.24

Hydrophobicity

0.807

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0