TPDB

3D PDB MODEL

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TPDB ID TPDB18263

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 28-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

AWLVHTQWFLDLPLPWLPGADTQGSNWI

FASTA

>TPDB18263|Antibacterial;Antiviral|length=28
AWLVHTQWFLDLPLPWLPGADTQGSNWI

Formula C158H221N37O39

Absent Amino Acids RCEKMY

Common Amino Acids L

Mass 3262.72

PI 3.88

Basic Residues 1

Acidic Residues 2

Hydrophobic Residues 14

Net Charge -2

Boman Index -5.13

Hydrophobicity 0.071

Aliphatic Index 101.07

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 22000

Absorbance 280nm 674.28

Polar Residues 6

number

2

A

0

R

1

N

2

D

0

C

0

E

2

Q

2

G

1

H

1

I

5

L

0

K

0

M

1

F

3

P

1

S

2

T

4

W

0

Y

1

V

Amino Acid Distribution

A: 2 R: 0 N: 1 D: 2 C: 0 E: 0 Q: 2 G: 2 H: 1 I: 1 L: 5 K: 0 M: 0 F: 1 P: 3 S: 1 T: 2 W: 4 Y: 0 V: 1

Length

28

Formula

C158H221N37O39

Mass

3262.72

PI

3.88

Net Charge

-2

Boman Index

-5.13

Hydrophobicity

0.071

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0