TPDB

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.

TPDB ID TPDB18262

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 19-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

AWLVHRQWFLDLPLPWLPG

FASTA

>TPDB18262|Antibacterial;Antiviral|length=19
AWLVHRQWFLDLPLPWLPG

Formula C118H166N28O23

Absent Amino Acids NCEIKMSTY

Common Amino Acids L

Mass 2344.79

PI 7.85

Basic Residues 2

Acidic Residues 1

Hydrophobic Residues 11

Net Charge +0

Boman Index -4.64

Hydrophobicity 0.274

Aliphatic Index 123.16

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 16500

Absorbance 280nm 703.69

Polar Residues 1

number

1

A

1

R

0

N

1

D

0

C

0

E

1

Q

1

G

1

H

0

I

5

L

0

K

0

M

1

F

3

P

0

S

0

T

3

W

0

Y

1

V

Amino Acid Distribution

A: 1 R: 1 N: 0 D: 1 C: 0 E: 0 Q: 1 G: 1 H: 1 I: 0 L: 5 K: 0 M: 0 F: 1 P: 3 S: 0 T: 0 W: 3 Y: 0 V: 1

Length

19

Formula

C118H166N28O23

Mass

2344.79

PI

7.85

Net Charge

+0

Boman Index

-4.64

Hydrophobicity

0.274

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0