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Peptide record

TPDB18207

Antibacterial Antifungal standard
40 amino acids
Basic Information
3D PDB MODEL
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TPDB18207
Antibacterial Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 40-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
ATCDLLSAYKVAHSACAAHCLLRGNRGGYCNSRAVCVCRN
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C173H284N60O52S6
EQIMFPW
A
4228.89
8.59
7
1
16
+4
1.53
0.155
78.25
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
3355
0.79
15
Residue Composition
number
7
A
4
R
3
N
1
D
6
C
0
E
0
Q
3
G
2
H
0
I
4
L
1
K
0
M
0
F
0
P
3
S
1
T
0
W
2
Y
3
V
Amino Acid Distribution
A: 7 R: 4 N: 3 D: 1 C: 6 E: 0 Q: 0 G: 3 H: 2 I: 0 L: 4 K: 1 M: 0 F: 0 P: 0 S: 3 T: 1 W: 0 Y: 2 V: 3
Chemical Descriptors
40 reviewed residue count
C173H284N60O52S6 sequence-only estimate (linear, free termini)
4228.89 sequence-only estimate (linear, free termini)
8.59 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
1.53 sequence-only estimate (linear, free termini)
0.155 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA