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Peptide record

TPDB18168

Antibacterial standard
8 amino acids
Basic Information
3D PDB MODEL
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TPDB18168
Antibacterial
Anti-infective peptides
Peptipedia
standard
No
A 8-aa standard-residue antibacterial peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
ASAEPTVH
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C34H54N10O13
RNDCQGILKMFWY
A
810.86
5.13
1
1
3
-1
1.22
-0.250
61.25
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
2
Residue Composition
number
2
A
0
R
0
N
0
D
0
C
1
E
0
Q
0
G
1
H
0
I
0
L
0
K
0
M
0
F
1
P
1
S
1
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 2 R: 0 N: 0 D: 0 C: 0 E: 1 Q: 0 G: 0 H: 1 I: 0 L: 0 K: 0 M: 0 F: 0 P: 1 S: 1 T: 1 W: 0 Y: 0 V: 1
Chemical Descriptors
8 reviewed residue count
C34H54N10O13 sequence-only estimate (linear, free termini)
810.86 sequence-only estimate (linear, free termini)
5.13 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
1.22 sequence-only estimate (linear, free termini)
-0.250 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA