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Peptide record

TPDB18124

Antibacterial Antifungal standard
45 amino acids
Basic Information
3D PDB MODEL
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TPDB18124
Antibacterial Antifungal
Anti-infective peptides
Peptipedia CAFPdb dbAMP
standard
No
A 45-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from Peptipedia, CAFPdb, and dbAMP, with an available 3D structural model.
Sequence
AQRCGDQARGAKCPNCLCCGKYGFCGSGDAYCGKGSCQSQCRGCR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C181H291N65O60S10
EHIMTWV
C
4658.30
8.31
7
2
8
+5
2.15
-0.569
17.56
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
3605
0.77
20
Residue Composition
number
4
A
4
R
1
N
2
D
10
C
0
E
4
Q
9
G
0
H
0
I
1
L
3
K
0
M
1
F
1
P
3
S
0
T
0
W
2
Y
0
V
Amino Acid Distribution
A: 4 R: 4 N: 1 D: 2 C: 10 E: 0 Q: 4 G: 9 H: 0 I: 0 L: 1 K: 3 M: 0 F: 1 P: 1 S: 3 T: 0 W: 0 Y: 2 V: 0
Chemical Descriptors
45 reviewed residue count
C181H291N65O60S10 sequence-only estimate (linear, free termini)
4658.30 sequence-only estimate (linear, free termini)
8.31 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
2.15 sequence-only estimate (linear, free termini)
-0.569 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP CAFPdb