TPDB

3D PDB MODEL

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TPDB ID TPDB17930

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 18-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

AIGWGDPITHWSHGQNRW

FASTA

>TPDB17930|Antibacterial;Antiviral|length=18
AIGWGDPITHWSHGQNRW

Formula C97H132N30O25

Absent Amino Acids CELKMFYV

Common Amino Acids GW

Mass 2118.30

PI 8.00

Basic Residues 3

Acidic Residues 1

Hydrophobic Residues 6

Net Charge +0

Boman Index -0.63

Hydrophobicity -0.978

Aliphatic Index 48.89

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 16500

Absorbance 280nm 778.93

Polar Residues 4

number

1

A

1

R

1

N

1

D

0

C

0

E

1

Q

3

G

2

H

2

I

0

L

0

K

0

M

0

F

1

P

1

S

1

T

3

W

0

Y

0

V

Amino Acid Distribution

A: 1 R: 1 N: 1 D: 1 C: 0 E: 0 Q: 1 G: 3 H: 2 I: 2 L: 0 K: 0 M: 0 F: 0 P: 1 S: 1 T: 1 W: 3 Y: 0 V: 0

Length

18

Formula

C97H132N30O25

Mass

2118.30

PI

8.00

Net Charge

+0

Boman Index

-0.63

Hydrophobicity

-0.978

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0