TPDB

3D PDB MODEL

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TPDB ID TPDB17890

Activity

Antibacterial Antiviral

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia AI4AVP dbAMP 3.0 DRAVP 2.0

Sequence_Type

standard

Has_Modification No

Description A 18-aa standard natural multi-activity (Antibacterial and Antiviral) peptide sequence curated from Peptipedia, AI4AVP, dbAMP 3.0, and other sources, with an available 3D structural model.

Sequence

AGALMFAWLLLGLQGIFN

FASTA

>TPDB17890|Antibacterial;Antiviral|length=18
AGALMFAWLLLGLQGIFN

Formula C94H143N21O21S1

Absent Amino Acids RDCEHKPSTYV

Common Amino Acids L

Mass 1935.36

PI 6.02

Basic Residues 0

Acidic Residues 0

Hydrophobic Residues 13

Net Charge -0

Boman Index -6.93

Hydrophobicity 1.517

Aliphatic Index 146.67

Half Life

Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 5500

Absorbance 280nm 284.19

Polar Residues 2

number

3

A

0

R

1

N

0

D

0

C

0

E

1

Q

3

G

0

H

1

I

5

L

0

K

1

M

2

F

0

P

0

S

0

T

1

W

0

Y

0

V

Amino Acid Distribution

A: 3 R: 0 N: 1 D: 0 C: 0 E: 0 Q: 1 G: 3 H: 0 I: 1 L: 5 K: 0 M: 1 F: 2 P: 0 S: 0 T: 0 W: 1 Y: 0 V: 0

Length

18

Formula

C94H143N21O21S1

Mass

1935.36

PI

6.02

Net Charge

-0

Boman Index

-6.93

Hydrophobicity

1.517

Evidence 1 Activity

Source & Reference

Database Source dbAMP 3.0 DRAVP 2.0