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Peptide record

TPDB17766

Antibacterial Antifungal standard
48 amino acids
Basic Information
3D PDB MODEL
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TPDB17766
Antibacterial Antifungal
Anti-infective peptides
pep-lab Peptipedia AFP-GFuse Antifungipept CAFPdb DRAMP dbAMP
standard
No
A 48-aa standard-residue multi-activity (Antibacterial and Antifungal) peptide sequence curated from pep-lab, Peptipedia, AFP-GFuse, and other sources, with an available 3D structural model.
Sequence
RVCMGKSAGFKGLCMRDQNCAQVCLQEGWGGGNCDGVMRQCKCIRQCW
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C216H350N72O63S11
HPTY
CG
5316.26
8.32
7
3
14
+4
1.71
-0.285
46.67
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
11500
2.16
16
Residue Composition
number
2
A
4
R
2
N
2
D
8
C
1
E
5
Q
8
G
0
H
1
I
2
L
3
K
3
M
1
F
0
P
1
S
0
T
2
W
0
Y
3
V
Amino Acid Distribution
A: 2 R: 4 N: 2 D: 2 C: 8 E: 1 Q: 5 G: 8 H: 0 I: 1 L: 2 K: 3 M: 3 F: 1 P: 0 S: 1 T: 0 W: 2 Y: 0 V: 3
Chemical Descriptors
48 reviewed residue count
C216H350N72O63S11 sequence-only estimate (linear, free termini)
5316.26 sequence-only estimate (linear, free termini)
8.32 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
1.71 sequence-only estimate (linear, free termini)
-0.285 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP DRAMP CAFPdb Antifungipept