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Peptide record

TPDB17679

Antibacterial standard
19 amino acids
Basic Information
3D PDB MODEL
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TPDB17679
Antibacterial
Anti-infective peptides
pep-lab Peptipedia
standard
No
A 19-aa standard-residue antibacterial peptide sequence curated from pep-lab and Peptipedia, with an available 3D structural model.
Sequence
GFVDFLKKVAGTIANVVTG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C90H146N22O25
RCEQHMPSWY
V
1936.28
9.88
2
1
10
+1
-0.36
0.889
112.63
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
3
Residue Composition
number
2
A
0
R
1
N
1
D
0
C
0
E
0
Q
3
G
0
H
1
I
1
L
2
K
0
M
2
F
0
P
0
S
2
T
0
W
0
Y
4
V
Amino Acid Distribution
A: 2 R: 0 N: 1 D: 1 C: 0 E: 0 Q: 0 G: 3 H: 0 I: 1 L: 1 K: 2 M: 0 F: 2 P: 0 S: 0 T: 2 W: 0 Y: 0 V: 4
Chemical Descriptors
19 reviewed residue count
C90H146N22O25 sequence-only estimate (linear, free termini)
1936.28 sequence-only estimate (linear, free termini)
9.88 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
-0.36 sequence-only estimate (linear, free termini)
0.889 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA