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Peptide record

TPDB17676

Antibacterial standard
18 amino acids
Basic Information
3D PDB MODEL
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TPDB17676
Antibacterial
Anti-infective peptides
pep-lab Peptipedia
standard
No
A 18-aa standard-residue antibacterial peptide sequence curated from pep-lab and Peptipedia, with an available 3D structural model.
Sequence
NDAACAAHCLFRGRSGGG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C70H111N27O23S2
EQIKMPTWYV
AG
1762.94
8.30
3
1
6
+1
1.77
-0.156
43.89
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
125
0.07
4
Residue Composition
number
4
A
2
R
1
N
1
D
2
C
0
E
0
Q
4
G
1
H
0
I
1
L
0
K
0
M
1
F
0
P
1
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 4 R: 2 N: 1 D: 1 C: 2 E: 0 Q: 0 G: 4 H: 1 I: 0 L: 1 K: 0 M: 0 F: 1 P: 0 S: 1 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
18 reviewed residue count
C70H111N27O23S2 sequence-only estimate (linear, free termini)
1762.94 sequence-only estimate (linear, free termini)
8.30 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
1.77 sequence-only estimate (linear, free termini)
-0.156 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA