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Peptide record

TPDB17664

Antibacterial standard
16 amino acids
Basic Information
3D PDB MODEL
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TPDB17664
Antibacterial
Anti-infective peptides
pep-lab Peptipedia
standard
No
A 16-aa standard-residue antibacterial peptide sequence curated from pep-lab and Peptipedia, with an available 3D structural model.
Sequence
VTCDILSVEAKGVKLG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C71H126N18O23S1
RNQHMFPWY
V
1631.95
6.35
2
2
7
-0
0.05
0.744
133.75
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
3
Residue Composition
number
1
A
0
R
0
N
1
D
1
C
1
E
0
Q
2
G
0
H
1
I
2
L
2
K
0
M
0
F
0
P
1
S
1
T
0
W
0
Y
3
V
Amino Acid Distribution
A: 1 R: 0 N: 0 D: 1 C: 1 E: 1 Q: 0 G: 2 H: 0 I: 1 L: 2 K: 2 M: 0 F: 0 P: 0 S: 1 T: 1 W: 0 Y: 0 V: 3
Chemical Descriptors
16 reviewed residue count
C71H126N18O23S1 sequence-only estimate (linear, free termini)
1631.95 sequence-only estimate (linear, free termini)
6.35 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
0.05 sequence-only estimate (linear, free termini)
0.744 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA