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Peptide record

TPDB17663

Antibacterial standard
16 amino acids
Basic Information
3D PDB MODEL
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TPDB17663
Antibacterial
Anti-infective peptides
pep-lab Peptipedia
standard
No
A 16-aa standard-residue antibacterial peptide sequence curated from pep-lab and Peptipedia, with an available 3D structural model.
Sequence
QGRVEVLYRGSWGTVC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C79H124N24O23S1
ANDHIKMFP
GV
1810.06
8.91
2
1
6
+1
1.55
-0.125
78.75
Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour
6990
3.86
5
Residue Composition
number
0
A
2
R
0
N
0
D
1
C
1
E
1
Q
3
G
0
H
0
I
1
L
0
K
0
M
0
F
0
P
1
S
1
T
1
W
1
Y
3
V
Amino Acid Distribution
A: 0 R: 2 N: 0 D: 0 C: 1 E: 1 Q: 1 G: 3 H: 0 I: 0 L: 1 K: 0 M: 0 F: 0 P: 0 S: 1 T: 1 W: 1 Y: 1 V: 3
Chemical Descriptors
16 reviewed residue count
C79H124N24O23S1 sequence-only estimate (linear, free termini)
1810.06 sequence-only estimate (linear, free termini)
8.91 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
1.55 sequence-only estimate (linear, free termini)
-0.125 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA