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Peptide record

TPDB17662

Antibacterial standard
16 amino acids
Basic Information
3D PDB MODEL
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TPDB17662
Antibacterial
Anti-infective peptides
pep-lab Peptipedia
standard
No
A 16-aa standard-residue antibacterial peptide sequence curated from pep-lab and Peptipedia, with an available 3D structural model.
Sequence
KKQLCSFEIYEVPWED
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C93H136N20O28S1
ARNGHMT
E
2014.28
4.16
2
4
6
-2
1.80
-0.756
66.88
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
6990
3.47
4
Residue Composition
number
0
A
0
R
0
N
1
D
1
C
3
E
1
Q
0
G
0
H
1
I
1
L
2
K
0
M
1
F
1
P
1
S
0
T
1
W
1
Y
1
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 1 C: 1 E: 3 Q: 1 G: 0 H: 0 I: 1 L: 1 K: 2 M: 0 F: 1 P: 1 S: 1 T: 0 W: 1 Y: 1 V: 1
Chemical Descriptors
16 reviewed residue count
C93H136N20O28S1 sequence-only estimate (linear, free termini)
2014.28 sequence-only estimate (linear, free termini)
4.16 sequence-only estimate (linear, free termini)
-2 sequence-only estimate (linear, free termini)
1.80 sequence-only estimate (linear, free termini)
-0.756 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA