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Peptide record

TPDB17658

Antibacterial standard
16 amino acids
Basic Information
3D PDB MODEL
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TPDB17658
Antibacterial
Anti-infective peptides
pep-lab Peptipedia
standard
No
A 16-aa standard-residue antibacterial peptide sequence curated from pep-lab and Peptipedia, with an available 3D structural model.
Sequence
APRKNVRWCTISQPEW
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C88H135N27O23S1
DGHLMFY
RPW
1971.27
10.10
3
1
5
+2
2.73
-1.056
48.75
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
11000
5.58
5
Residue Composition
number
1
A
2
R
1
N
0
D
1
C
1
E
1
Q
0
G
0
H
1
I
0
L
1
K
0
M
0
F
2
P
1
S
1
T
2
W
0
Y
1
V
Amino Acid Distribution
A: 1 R: 2 N: 1 D: 0 C: 1 E: 1 Q: 1 G: 0 H: 0 I: 1 L: 0 K: 1 M: 0 F: 0 P: 2 S: 1 T: 1 W: 2 Y: 0 V: 1
Chemical Descriptors
16 reviewed residue count
C88H135N27O23S1 sequence-only estimate (linear, free termini)
1971.27 sequence-only estimate (linear, free termini)
10.10 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
2.73 sequence-only estimate (linear, free termini)
-1.056 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA