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Peptide record

TPDB17638

Antibacterial standard
14 amino acids
Basic Information
3D PDB MODEL
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TPDB17638
Antibacterial
Anti-infective peptides
pep-lab Peptipedia
standard
No
A 14-aa standard-residue antibacterial peptide sequence curated from pep-lab and Peptipedia, with an available 3D structural model.
Sequence
EDRMSLVDSRCQEA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C63H107N21O26S2
NGHIKFPTWY
RDES
1638.79
4.06
2
4
4
-2
4.20
-0.993
55.71
Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour
0
0.00
4
Residue Composition
number
1
A
2
R
0
N
2
D
1
C
2
E
1
Q
0
G
0
H
0
I
1
L
0
K
1
M
0
F
0
P
2
S
0
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 1 R: 2 N: 0 D: 2 C: 1 E: 2 Q: 1 G: 0 H: 0 I: 0 L: 1 K: 0 M: 1 F: 0 P: 0 S: 2 T: 0 W: 0 Y: 0 V: 1
Chemical Descriptors
14 reviewed residue count
C63H107N21O26S2 sequence-only estimate (linear, free termini)
1638.79 sequence-only estimate (linear, free termini)
4.06 sequence-only estimate (linear, free termini)
-2 sequence-only estimate (linear, free termini)
4.20 sequence-only estimate (linear, free termini)
-0.993 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA