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Peptide record

TPDB17622

Antibacterial standard
9 amino acids
Basic Information
3D PDB MODEL
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TPDB17622
Antibacterial
Anti-infective peptides
pep-lab Peptipedia
standard
No
A 9-aa standard-residue antibacterial peptide sequence curated from pep-lab and Peptipedia, with an available 3D structural model.
Sequence
RKSGDPLGR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C40H72N16O13
ANCEQHIMFTWYV
RG
985.11
11.32
3
1
1
+2
4.52
-1.756
43.33
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
0
0.00
1
Residue Composition
number
0
A
2
R
0
N
1
D
0
C
0
E
0
Q
2
G
0
H
0
I
1
L
1
K
0
M
0
F
1
P
1
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 2 N: 0 D: 1 C: 0 E: 0 Q: 0 G: 2 H: 0 I: 0 L: 1 K: 1 M: 0 F: 0 P: 1 S: 1 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
9 reviewed residue count
C40H72N16O13 sequence-only estimate (linear, free termini)
985.11 sequence-only estimate (linear, free termini)
11.32 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
4.52 sequence-only estimate (linear, free termini)
-1.756 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA