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Peptide record

TPDB17612

Antibacterial standard
8 amino acids
Basic Information
3D PDB MODEL
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TPDB17612
Antibacterial
Anti-infective peptides
pep-lab Peptipedia
standard
No
A 8-aa standard-residue antibacterial peptide sequence curated from pep-lab and Peptipedia, with an available 3D structural model.
Sequence
CKDDQNPH
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C37H57N13O15S1
AREGILMFSTWYV
D
956.00
5.10
2
2
0
-1
4.82
-2.525
0.00
Mammalian: 1.2 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
3
Residue Composition
number
0
A
0
R
1
N
2
D
1
C
0
E
1
Q
0
G
1
H
0
I
0
L
1
K
0
M
0
F
1
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 1 D: 2 C: 1 E: 0 Q: 1 G: 0 H: 1 I: 0 L: 0 K: 1 M: 0 F: 0 P: 1 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
8 reviewed residue count
C37H57N13O15S1 sequence-only estimate (linear, free termini)
956.00 sequence-only estimate (linear, free termini)
5.10 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
4.82 sequence-only estimate (linear, free termini)
-2.525 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA