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Peptide record

TPDB17606

Antibacterial standard
6 amino acids
Basic Information
3D PDB MODEL
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TPDB17606
Antibacterial
Anti-infective peptides
pep-lab Peptipedia
standard
No
A 6-aa standard-residue antibacterial peptide sequence curated from pep-lab and Peptipedia, with an available 3D structural model.
Sequence
ISCDKF
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C31H49N7O10S1
ARNEQGHLMPTWYV
DCIKFS
711.83
6.09
1
1
2
-0
1.42
0.267
65.00
Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour
0
0.00
2
Residue Composition
number
0
A
0
R
0
N
1
D
1
C
0
E
0
Q
0
G
0
H
1
I
0
L
1
K
0
M
1
F
0
P
1
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 1 C: 1 E: 0 Q: 0 G: 0 H: 0 I: 1 L: 0 K: 1 M: 0 F: 1 P: 0 S: 1 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
6 reviewed residue count
C31H49N7O10S1 sequence-only estimate (linear, free termini)
711.83 sequence-only estimate (linear, free termini)
6.09 sequence-only estimate (linear, free termini)
-0 sequence-only estimate (linear, free termini)
1.42 sequence-only estimate (linear, free termini)
0.267 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA