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Peptide record

TPDB17601

Antibacterial standard
16 amino acids
Basic Information
3D PDB MODEL
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TPDB17601
Antibacterial
Anti-infective peptides
pep-lab Peptipedia
standard
No
A 16-aa standard-residue antibacterial peptide sequence curated from pep-lab and Peptipedia, with an available 3D structural model.
Sequence
GLLDVVGNVLHSLGLG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C70H119N19O21
ARCEQIKMFPTWY
L
1562.83
4.94
1
1
8
-1
-1.07
1.188
176.25
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
0
0.00
2
Residue Composition
number
0
A
0
R
1
N
1
D
0
C
0
E
0
Q
4
G
1
H
0
I
5
L
0
K
0
M
0
F
0
P
1
S
0
T
0
W
0
Y
3
V
Amino Acid Distribution
A: 0 R: 0 N: 1 D: 1 C: 0 E: 0 Q: 0 G: 4 H: 1 I: 0 L: 5 K: 0 M: 0 F: 0 P: 0 S: 1 T: 0 W: 0 Y: 0 V: 3
Chemical Descriptors
16 reviewed residue count
C70H119N19O21 sequence-only estimate (linear, free termini)
1562.83 sequence-only estimate (linear, free termini)
4.94 sequence-only estimate (linear, free termini)
-1 sequence-only estimate (linear, free termini)
-1.07 sequence-only estimate (linear, free termini)
1.188 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA