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Peptide record

TPDB17588

Antibacterial standard
12 amino acids
Basic Information
3D PDB MODEL
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TPDB17588
Antibacterial
Anti-infective peptides
DRAMP Peptipedia
standard
No
A 12-aa standard-residue antibacterial peptide sequence curated from DRAMP and Peptipedia, with an available 3D structural model.
Sequence
LAKKIYRAWKRR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C74H125N25O14
NDCEQGHMFPSTV
RK
1588.97
12.15
6
0
6
+6
3.81
-1.292
81.67
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
6990
4.40
1
Residue Composition
number
2
A
3
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
1
I
1
L
3
K
0
M
0
F
0
P
0
S
0
T
1
W
1
Y
0
V
Amino Acid Distribution
A: 2 R: 3 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 1 L: 1 K: 3 M: 0 F: 0 P: 0 S: 0 T: 0 W: 1 Y: 1 V: 0
Chemical Descriptors
12 reviewed residue count
C74H125N25O14 sequence-only estimate (linear, free termini)
1588.97 sequence-only estimate (linear, free termini)
12.15 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
3.81 sequence-only estimate (linear, free termini)
-1.292 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

DRAMP