Back to search

Peptide record

TPDB17587

Antibacterial standard
12 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB17587
Antibacterial
Anti-infective peptides
DRAMP Peptipedia
standard
No
A 12-aa standard-residue antibacterial peptide sequence curated from DRAMP and Peptipedia, with an available 3D structural model.
Sequence
LAIKIYRAWKRR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C74H124N24O14
NDCEQGHMFPSTV
R
1573.95
12.14
5
0
7
+5
2.94
-0.592
114.17
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
6990
4.44
1
Residue Composition
number
2
A
3
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
2
I
1
L
2
K
0
M
0
F
0
P
0
S
0
T
1
W
1
Y
0
V
Amino Acid Distribution
A: 2 R: 3 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 2 L: 1 K: 2 M: 0 F: 0 P: 0 S: 0 T: 0 W: 1 Y: 1 V: 0
Chemical Descriptors
12 reviewed residue count
C74H124N24O14 sequence-only estimate (linear, free termini)
1573.95 sequence-only estimate (linear, free termini)
12.14 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
2.94 sequence-only estimate (linear, free termini)
-0.592 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

DRAMP