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Peptide record

TPDB17549

Antibacterial standard
380 amino acids
Basic Information
3D PDB MODEL
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TPDB17549
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 380-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
ATNSSEAFIESIAASAKPVADANGLYPSVMIAQAILESNWGSSQLSRAPYYNLFGIQGTYQGKSVVFKTQEYLNGKWVTKDMPFRVYPSFNQSFQDNTYVLKTTNFGNGPYYAKAWRANAATYQDATAALTGKYATDPSYGASLNRIISQYNLTRFDGASSAGNTNSGGSTTTNTNNNSGTNSSSTTYTVKSGDTLWGISQRYGISVAQIQSANNLKSTIIYIGQKLLLTGSASSTNSGGSNNSASTTPTTSVTPAKPASQTSVKVKSGDTLWALSVKYKTSIAQLKSWNHLSSDTIYIGQNLIVSQSAATSNPSTGSGSTATNNSNSTSSNSNASIHKVVKGDTLWGLSQKSGSPIASIKAWNHLSSDTILIGQYLRIK
Physicochemical Analysis
C1764H2757N489O585S2
C
S
40239.34
9.96
32
15
136
+14
28.59
-0.394
69.92
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
72310
179.70
174
Residue Composition
number
36
A
7
R
33
N
11
D
0
C
4
E
19
Q
30
G
3
H
23
I
24
L
22
K
2
M
8
F
12
P
62
S
41
T
8
W
19
Y
16
V
Amino Acid Distribution
A: 36 R: 7 N: 33 D: 11 C: 0 E: 4 Q: 19 G: 30 H: 3 I: 23 L: 24 K: 22 M: 2 F: 8 P: 12 S: 62 T: 41 W: 8 Y: 19 V: 16
Chemical Descriptors
380
C1764H2757N489O585S2
40239.34
9.96
+14
28.59
-0.394
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.