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Peptide record

TPDB17548

Antibacterial standard
498 amino acids
Basic Information
3D PDB MODEL
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TPDB17548
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 498-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
AHDRNPLEECFRETDYEEFLEIAKNGLTATSNPKRVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERVGGRVRTYRKKDWYANLGPMRLPTKHRIVREYIKKFDLKLNEFSQENENAWYFIKNIRKRVREVKNNPGLLEYPVKPSEEGKSAAQLYVESLRKVVEELRSTNCKYILDKYDTYSTKEYLLKEGNLSPGAVDMIGDLLNEDSGYYVSFIESLKHDDIFGYEKRFDEIVGGMDQLPTSMYEAIKEKVQVHFNARVIEIQQNDREATVTYQTSANEMSSVTADYVIVCTTSRAARRIKFEPPLPPKKAHALRSVHYRSGTKIFLTCTKKFWEDDGIHGGKSTTDLPSRFIYYPNHNFTSGVGVIIAYGIGDDANFFQALDFKDCADIVINDLSLIHELPKEDIQTFCHPSMIQRWSLDKYAMGGITTFTPYQFQHFSEALTAPFKRIYFAGEYTAQFHGWIDSTIKSGLTAARDVNRASENPSGIHLSNDNEF
Physicochemical Analysis
C2540H3915N687O759S14
E
56669.01
6.31
76
67
197
-4
119.33
-0.467
77.17
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
66615
117.55
132
Residue Composition
number
36
A
28
R
24
N
29
D
6
C
38
E
14
Q
32
G
14
H
32
I
35
L
34
K
8
M
25
F
20
P
32
S
30
T
5
W
26
Y
30
V
Amino Acid Distribution
A: 36 R: 28 N: 24 D: 29 C: 6 E: 38 Q: 14 G: 32 H: 14 I: 32 L: 35 K: 34 M: 8 F: 25 P: 20 S: 32 T: 30 W: 5 Y: 26 V: 30
Chemical Descriptors
498
C2540H3915N687O759S14
56669.01
6.31
-4
119.33
-0.467
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.