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Peptide record

TPDB17546

Antibacterial standard
499 amino acids
Basic Information
3D PDB MODEL
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TPDB17546
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 499-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
ADDRRRPLEECFQEADYEEFLEIARNGLNETSNPKHVVVVGAGMAGLSAAYVLAGAGHNVTLLEASERVGGRVNTYRNETEGWYVNLGPMRLPERHRIIREYIRKFGLKLNEFLQENENAWYFIRNIRKRVWEVKKDPGVFKYPVEPSEEGKSASQLYRESLEKVIEELKRTNCSYILNKYDTYSTKEYLIKEGNLSRGAVDMIGKLPNEDSSYYLSFIESLKSDDLFSYEKRFDEIVGGFDQLPISMYQAIAEMVHLNAQVIKIQHNAEEVRVAYQTPAKTLSYVTADYVIVCSTSRAARRIYFEPPLPPKKAHALRSIHYRSGTKIFLTCTRKFWEADGIHGGKSTTDLPSRFIYYPNHNFTSDVGVIVAYTLADDADFFQALDIKTSADIVINDLSLIHQLPKEEIQALCYPSMIKKWSLDKYAMGAITSFTPYQFQDFIETVAAPVGRIYFAGEYTARVHGWLDSTIKSGLTAARDVNRASQKPSRRQLSNDNEL
Physicochemical Analysis
C2560H3964N694O759S12
AEL
56992.55
6.47
74
66
207
-2
113.75
-0.422
83.09
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
76460
134.16
132
Residue Composition
number
40
A
33
R
23
N
26
D
5
C
40
E
15
Q
28
G
11
H
33
I
40
L
30
K
7
M
21
F
21
P
35
S
25
T
6
W
29
Y
31
V
Amino Acid Distribution
A: 40 R: 33 N: 23 D: 26 C: 5 E: 40 Q: 15 G: 28 H: 11 I: 33 L: 40 K: 30 M: 7 F: 21 P: 21 S: 35 T: 25 W: 6 Y: 29 V: 31
Chemical Descriptors
499
C2560H3964N694O759S12
56992.55
6.47
-2
113.75
-0.422
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.