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Peptide record

TPDB17545

Antibacterial standard
499 amino acids
Basic Information
3D PDB MODEL
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TPDB17545
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 499-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
ADVRRNPLEECFREADYEEFLEIARNGLKKTSNPKHVVVVGAGMAGLSAAYVLAGAGHKVTLLEASERVGGRVHTYRNEKEGWYVNLGPMRLPERHRIIREYIRKFGLKLNEFFQENENAWYFIRNIRKRVWEVKKDPGVFKYPVKPSEEGKSASQLYRESLKKVIEELKRTNCSYILNKYDTYSTKEYLIKEGNLSRGAVDMIGDLLNEDSSYYLSFIESLKSDDLFSYEKRFDEIVGGFDQLPISMYQAIAEMVHLNAQVIKIQHNAEKVRVAYQTPAKTLSYVTADYVIVCSSSRAARRIYFEPPLPPKKAHALRSIHYKSGTKIFLTCSKKFWEADGIHGGKSTTDLPSRFIYYPNHNFTSGVGVIVAYTISDDADFFQSLDIKTSADIVINDLSLIHQLPKKEIQALCYPSMIKKWSLDKYAMGSITSFAPYQFQDFIERVAAPVGRIYFAGEYTARVHGWLDSTIKSGLTAARDVNRASQKPSRRQLSNDNEL
Physicochemical Analysis
C2572H4001N699O744S12
S
57004.02
9.28
83
60
207
+12
109.10
-0.417
83.27
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
76460
134.13
129
Residue Composition
number
38
A
32
R
21
N
25
D
5
C
35
E
14
Q
29
G
12
H
34
I
39
L
39
K
7
M
22
F
20
P
40
S
20
T
6
W
29
Y
32
V
Amino Acid Distribution
A: 38 R: 32 N: 21 D: 25 C: 5 E: 35 Q: 14 G: 29 H: 12 I: 34 L: 39 K: 39 M: 7 F: 22 P: 20 S: 40 T: 20 W: 6 Y: 29 V: 32
Chemical Descriptors
499
C2572H4001N699O744S12
57004.02
9.28
+12
109.10
-0.417
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.