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Peptide record

TPDB17542

Antibacterial standard
445 amino acids
Basic Information
3D PDB MODEL
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TPDB17542
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 445-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
QKGLDYACQQGVAVLQKELEKIRIPDVSGKFKLRPFGKGHYNFHSLVVRSFQLPNPQIRLQPNVGLRVSISNANVRIGGRWKARKGFIKVRGKFDLSVEGVSISADLKLGSVPASGRATVTCSSCSSNINRARLRSQASWGGWLKLFHKRIESSLRNTMNSKICQVLTSSVSSKLQPYVETLPLKERLDSVAGIDYSLVAPPRATADSLDMQLKGEFYNVARPSPPPFMPPPMAIPSLHDRMIYLAISDYLFNTAALVYQQAGAFGLTLRDDMIPKESKSRLTTKFLGKALPQVAKMFPNMNVQLTLSVSSPPHLTTRPTGIALTAAVDLQAFAILPNSSLASLFLLGLKLNTSAKIGTKADKLVGELTLGRLILELKHSNIGSFPVQLLQALMDYVLSAVVLPKVNEKLQRGLPLPMPRKVQLYDLVLQPHQDFLLLGANVQHG
Physicochemical Analysis
C2202H3576N610O612S14
L
48837.18
10.48
63
28
190
+28
60.99
-0.025
102.54
Mammalian: 0.8 hour Yeast: 10 min E.coli: >10 hour
31650
64.81
114
Residue Composition
number
33
A
25
R
18
N
17
D
4
C
11
E
23
Q
29
G
8
H
20
I
64
L
30
K
10
M
17
F
31
P
41
S
18
T
3
W
10
Y
33
V
Amino Acid Distribution
A: 33 R: 25 N: 18 D: 17 C: 4 E: 11 Q: 23 G: 29 H: 8 I: 20 L: 64 K: 30 M: 10 F: 17 P: 31 S: 41 T: 18 W: 3 Y: 10 V: 33
Chemical Descriptors
445
C2202H3576N610O612S14
48837.18
10.48
+28
60.99
-0.025
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.