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Peptide record

TPDB17536

Antibacterial standard
456 amino acids
Basic Information
3D PDB MODEL
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TPDB17536
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 456-aa standard natural antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
VNPGVVVRISQKGLDYASQQGTAALQKELKRIKIPDYSDSFKIKHLGKGHYSFYSMDIREFQLPSSQISMVPNVGLKFSISNANIKISGKWKAQKRFLKMSGNFDLSIEGMSISADLKLGSNPTSGKPTITCSSCSSHINSVHVHISKSKVGWLIQLFHKKIESALRNKMNSQVCEKVTNSVSSELQPYFQTLPVMTKIDSVAGINYGLVAPPATTAETLDVQMKGEFYSENHHNPPPFAPPVMEFPAAHDRMVYLGLSDYFFNTAGLVYQEAGVLKMTLRDDMIPKESKFRLTTKFFGTFLPEVAKKFPNMKIQIHVSASTPPHLSVQPTGLTFYPAVDVQAFAVLPNSSLASLFLIGMHTTGSMEVSAESNRLVGELKLDRLLLELKHSNIGPFPVELLQDIMNYIVPILVLPRVNEKLQKGFPLPTPARVQLYNVVLQPHQNFLLFGADVVYK
Physicochemical Analysis
C2301H3628N600O649S18
L
50658.83
9.68
61
35
191
+13
75.29
-0.083
91.45
Mammalian: 100 hour Yeast: >20 hour E.coli: >10 hour
31985
63.14
125
Residue Composition
number
25
A
12
R
22
N
16
D
3
C
19
E
21
Q
26
G
14
H
26
I
47
L
35
K
15
M
25
F
32
P
44
S
21
T
2
W
14
Y
37
V
Amino Acid Distribution
A: 25 R: 12 N: 22 D: 16 C: 3 E: 19 Q: 21 G: 26 H: 14 I: 26 L: 47 K: 35 M: 15 F: 25 P: 32 S: 44 T: 21 W: 2 Y: 14 V: 37
Chemical Descriptors
456
C2301H3628N600O649S18
50658.83
9.68
+13
75.29
-0.083
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.