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Peptide record

TPDB17084

Antibacterial standard
7 amino acids
Basic Information
3D PDB MODEL
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TPDB17084
Antibacterial
Anti-infective peptides
dbAMP
standard
No
A 7-aa standard-residue antibacterial peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
KVLGRLV
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C36H69N11O8
ANDCEQHIMFPSTWY
LV
784.01
11.49
2
0
4
+2
0.23
1.029
194.29
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
0
0.00
0
Residue Composition
number
0
A
1
R
0
N
0
D
0
C
0
E
0
Q
1
G
0
H
0
I
2
L
1
K
0
M
0
F
0
P
0
S
0
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 0 L: 2 K: 1 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 2
Chemical Descriptors
7 reviewed residue count
C36H69N11O8 sequence-only estimate (linear, free termini)
784.01 sequence-only estimate (linear, free termini)
11.49 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
0.23 sequence-only estimate (linear, free termini)
1.029 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.