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Peptide record

TPDB17032

Antibacterial standard
8 amino acids
Basic Information
3D PDB MODEL
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TPDB17032
Antibacterial
Anti-infective peptides
dbAMP Peptipedia
standard
No
A 8-aa standard-residue antibacterial peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
LKLLKKLL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C48H93N11O9
ARNDCEQGHIMFPSTWYV
L
968.33
10.84
3
0
5
+3
-0.99
0.912
243.75
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
0
0.00
0
Residue Composition
number
0
A
0
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
0
I
5
L
3
K
0
M
0
F
0
P
0
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 5 K: 3 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
8 reviewed residue count
C48H93N11O9 sequence-only estimate (linear, free termini)
968.33 sequence-only estimate (linear, free termini)
10.84 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
-0.99 sequence-only estimate (linear, free termini)
0.912 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.