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Peptide record

TPDB16895

Antibacterial standard
16 amino acids
Basic Information
3D PDB MODEL
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TPDB16895
Antibacterial
Anti-infective peptides
dbAMP Peptipedia
standard
No
A 16-aa standard-residue antibacterial peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
EDIGHIKYCGIVDDCY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C80H119N19O27S2
ARNQLMFPSTW
DI
1843.06
3.96
2
4
6
-3
1.26
-0.113
91.25
Mammalian: 1 hour Yeast: 30 min E.coli: >10 hour
3105
1.68
4
Residue Composition
number
0
A
0
R
0
N
3
D
2
C
1
E
0
Q
2
G
1
H
3
I
0
L
1
K
0
M
0
F
0
P
0
S
0
T
0
W
2
Y
1
V
Amino Acid Distribution
A: 0 R: 0 N: 0 D: 3 C: 2 E: 1 Q: 0 G: 2 H: 1 I: 3 L: 0 K: 1 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 2 V: 1
Chemical Descriptors
16 reviewed residue count
C80H119N19O27S2 sequence-only estimate (linear, free termini)
1843.06 sequence-only estimate (linear, free termini)
3.96 sequence-only estimate (linear, free termini)
-3 sequence-only estimate (linear, free termini)
1.26 sequence-only estimate (linear, free termini)
-0.113 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.