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Peptide record

TPDB16517

Antibacterial standard
8 amino acids
Basic Information
3D PDB MODEL
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TPDB16517
Antibacterial
Anti-infective peptides
dbAMP Peptipedia
standard
No
A 8-aa standard-residue antibacterial peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
PFRLSLHL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C47H75N13O10
ANDCEQGIKMTWYV
L
982.19
11.05
2
0
4
+1
0.66
0.512
146.25
Mammalian: >20 hour Yeast: >20 hour E.coli: ?
0
0.00
1
Residue Composition
number
0
A
1
R
0
N
0
D
0
C
0
E
0
Q
0
G
1
H
0
I
3
L
0
K
0
M
1
F
1
P
1
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 1 I: 0 L: 3 K: 0 M: 0 F: 1 P: 1 S: 1 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
8 reviewed residue count
C47H75N13O10 sequence-only estimate (linear, free termini)
982.19 sequence-only estimate (linear, free termini)
11.05 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
0.66 sequence-only estimate (linear, free termini)
0.512 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.