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Peptide record

TPDB16475

Antibacterial standard
10 amino acids
Basic Information
3D PDB MODEL
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TPDB16475
Antibacterial
Anti-infective peptides
dbAMP Peptipedia
standard
No
A 10-aa standard-residue antibacterial peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
NVNRHIVDKL
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C52H90N18O15
ACEQGMFPSTWY
NV
1207.40
10.09
3
1
4
+1
2.92
-0.540
136.00
Mammalian: 1.4 hour Yeast: 3 min E.coli: >10 hour
0
0.00
2
Residue Composition
number
0
A
1
R
2
N
1
D
0
C
0
E
0
Q
0
G
1
H
1
I
1
L
1
K
0
M
0
F
0
P
0
S
0
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 0 R: 1 N: 2 D: 1 C: 0 E: 0 Q: 0 G: 0 H: 1 I: 1 L: 1 K: 1 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 2
Chemical Descriptors
10 reviewed residue count
C52H90N18O15 sequence-only estimate (linear, free termini)
1207.40 sequence-only estimate (linear, free termini)
10.09 sequence-only estimate (linear, free termini)
+1 sequence-only estimate (linear, free termini)
2.92 sequence-only estimate (linear, free termini)
-0.540 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.