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Peptide record

TPDB16362

Antibacterial standard
82 amino acids
Basic Information
3D PDB MODEL
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TPDB16362
Antibacterial
Anti-infective peptides
dbAMP Peptipedia
standard
No
A 82-aa standard natural antibacterial peptide sequence curated from dbAMP and Peptipedia, with an available 3D structural model.
Sequence
MAEVDPSKMADAAIAKEPEVLNLKMSEAFDWSDDDTVVRDAIWDYFMENNNHDTVKTEEAEKPFLDMKDEEVRDFVEKNLKK
Physicochemical Analysis
C418H644N106O141S5
CQG
D
9570.64
4.09
12
23
33
-12
38.69
-0.841
63.05
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
12490
130.50
12
Residue Composition
number
8
A
2
R
5
N
12
D
0
C
11
E
0
Q
0
G
1
H
2
I
4
L
9
K
5
M
4
F
3
P
3
S
3
T
2
W
1
Y
7
V
Amino Acid Distribution
A: 8 R: 2 N: 5 D: 12 C: 0 E: 11 Q: 0 G: 0 H: 1 I: 2 L: 4 K: 9 M: 5 F: 4 P: 3 S: 3 T: 3 W: 2 Y: 1 V: 7
Chemical Descriptors
82
C418H644N106O141S5
9570.64
4.09
-12
38.69
-0.841
Evidence Records 1 records
Evidence 1 Activity

Activity

Antibacterial

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antibacterial
dbAMP classified as Antibacterial under the Anti-bacterial function class.
Diffusion zone assay: active against Gram+ S. aureus ATCC 29213, 25923 (18.8 mm), E. faecalis ATCC 29212 (11 mm), L. monocytogenes CMCC 54004 (17.9 mm), Gram- E. coli ATCC 25922 (17 mm), Salmonella CMCC 50071 (17.7 mm), C. sakazakii ATCC 29544 (19.4 mm), also active against antibiotic0resistant C. sakazakii (17.4-18 mm) and Salmonella 557D (13.9 mm). Reg. 11/2021